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Following the synthesis of their polypeptide chain,many proteins require further posttranslational modifications before they attain their full biological activity or function.List and describe briefly at least four possible types of modification that can occur.

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(1)Amino-terminal modification (N-acetyl...

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A given mRNA sequence might be translated in any of three reading frames.Describe how prokaryotes and eukaryotes determine the correct reading frame.

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In prokaryotes,the Shine-Dalgarno sequen...

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Number the following steps in the proper order with regard to protein synthesis. ___ Aminoacyl-tRNA binds to the A site. ___ Deacylated tRNA is released from ribosome. ___ Peptide bond formation shifts the growing peptide from the P to the A site. ___ The 50S subunit binds to the initiation complex of the 30S subunit and mRNA.

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The signal sequences that direct proteins to the nucleus are:


A) always at the amino terminus of the targeted protein.
B) cleaved after the protein arrives in the nucleus.
C) glycosyl moieties containing mannose 6-phosphate residues.
D) not located at the ends of the peptide,but in its interior.
E) the same as those that direct certain proteins to lysosomes.

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Which of the following statements about bacterial mRNA is true?


A) A ribosome usually initiates translation near the end of the mRNA that is synthesized last.
B) An mRNA is never degraded but is passed on to the daughter cells at cell division.
C) During polypeptide synthesis,ribosomes move along the mRNA in the direction 5' β†’\rightarrow 3'.
D) Ribosomes cannot initiate internally in a polycistronic transcript.
E) The codon signaling peptide termination is located in the mRNA near its 5' end.

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Which one of the following antibiotics does not function by interfering with the translational process?


A) Chloramphenicol
B) Cycloheximide
C) Penicillin
D) Puromycin
E) Streptomycin

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Which of the following is true about the sorting pathway for proteins destined for incorporation into lysosomes or the plasma membrane of eukaryotic cells?


A) Binding of SRP to the signal peptide and the ribosome temporarily accelerates
B) The newly synthesized polypeptides include a signal peptide at their carboxyl termini.
C) The signal peptide is cleaved off inside the mitochondria by signal peptidase.
D) The SRP binds to the signal peptide soon after it appears outside the ribosome.
E) The signal sequence is added to the polypeptide in a posttranslational modification reaction.

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In E.coli,aminoacyl-tRNA synthetases:


A) activate amino acids in 12 steps.
B) are amino acid-specific;there is at least one enzyme specific for each amino acid.
C) fall into two classes,each of which attaches amino acids to different ends of the tRNA.
D) have no proofreading activities.
E) require a tRNA,an amino acid,and GTP as substrates.

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You have isolated a fragment of viral DNA that totally encodes at least two proteins,120 and 80 amino acids long.The DNA fragment is 400 base pairs long. (a)Why might you consider this unusual? (b)You sequence the two proteins and find no sequence homology.Propose a model to account for these findings.

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(a)Two distinct proteins of these sizes ...

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Consider the following hypothetical short mRNA;what would be the sequence of the protein produced if this were translated in an E.coli cell? 5'-AUAGGAGGUUUGACCUAUGCCUCGUUUAUAGCC-3'

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Match the factor or enzyme at the right with the stage(s) of protein synthesis at which it acts. If a factor or enzyme participates in two stages of protein synthesis, indicate both of them.

Premises
Initiation
Amino acid activation
Elongation
Termination
Responses
Aminoacyl-tRNA
Shine-Dalgarno sequence
RF1
EF-Tu

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Initiation
Amino acid activation
Elongation
Termination

Assuming that the average amino acid residue contributes 110 to the peptide molecular weight,what will be the minimum length of the mRNA encoding a protein of molecular weight 50,000?


A) 133 nucleotides
B) 460 nucleotides
C) 1,400 nucleotides
D) 5,000 nucleotides
E) A minimum length cannot be determined from the data given.

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Which one of the following is not true about RNA editing?


A) RNA editing occurs mostly in mitochondria and chloroplasts.
B) RNA editing requires guide RNAs that have sequences complementary to the edited mRNA.
C) Deamination of G is a common reaction in RNA editing.
D) Deamination of A is common reaction in RNA editing.
E) RNA editing allows for the synthesis of two different proteins from one gene.

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Which of the following is not one of the five steps of


A) Termination and ribosome degradation
B) Elongation of the peptide chain
C) Initiation of peptide synthesis
D) Activation of the amino acids
E) Protein folding and posttranslational processing

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Describe the role of ubiquitin in mediating intracellular protein breakdown.

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Ubiquitin,a protein found in all eukaryo...

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In bacteria the elongation stage of


A) aminoacyl-tRNAs.
B) EF-Tu.
C) GTP.
D) IF-2.
E) peptidyl transferase.

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When first synthesized,proinsulin has an additional leader or signal peptide at its amino terminus.This complete molecule is called preproinsulin and the signal peptide is cleaved off to give proinsulin.Briefly,what is the likely function of the signal peptide?

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The leader peptide in proinsulin is a si...

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The template strand of a segment of double-stranded DNA contains the sequence: (5')-CTT TGA TAA GGA TAG CCC TTC-(3') (a)What is the base sequence of the mRNA that can be transcribed from this strand? (b)What amino acid sequence could be coded by the mRNA base sequence in (a),using only the first reading frame starting at the 5' end? (c)Suppose the other (complementary)strand is used as a template for transcription.What is the amino acid sequence of the resulting peptide,again starting from the 5' end and using only the first reading frame?

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(a)(5')GAA GGG CUA UCC UUA UCA...

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Glycosylation of proteins inside the endoplasmic reticulum does not involve:


A) a His residue on the protein.
B) an Asn residue on the protein.
C) dolichol phosphate.
D) glucose.
E) N-acetylglucosamine.

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Indicate whether each of the following statements is true (T)or false (F). ___Assembly of a complete ribosome onto an mRNA requires ATP hydrolysis. ___Aminoacylation or "charging" of tRNA requires the formation of an aminoacyl-AMP intermediate. ___Aminoacyl-tRNA binding to the A site of the ribosome requires the accessory factor EF-G and GTP hydrolysis. ___Translocation of a growing polypeptide from the A to the P site on the ribosome requires EF-G and GTP hydrolysis. ___Termination of translation requires release factors,but no NTP hydrolysis.

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