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DNA-binding transactivating proteins often possess a domain separate from their DNA-binding domains that serves as a docking site for interactions with the transcription complex,coactivators,corepressors,or even chromatin remodeling proteins,to regulate gene transcription.Describe three known kinds of such domains,and provide an example of each.

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(1)Gal4p (in yeast)has an acidic activat...

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Which one of the following does not interact with mediator?


A) TATA box
B) TATA binding protein
C) CTD of RNA polymerase
D) TFIIH
E) Modification and remodeling enzymes

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Gene silencing by RNA interference acts by of the target gene.


A) inhibiting transcription
B) inhibiting translation
C) inhibiting splicing
D) degradation of the mRNA
E) inhibiting polyadenylyation

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Which one of the following statements about eukaryotic versus prokaryotic gene regulation is not correct?


A) Access to eukaryotic promoters is restricted by the structure of chromatin.
B) Most regulation is positive,involving activators rather than repressors.
C) Larger and more multimeric proteins are involved in regulation of eukaryotic transcription.
D) Transcription and translation are separated in both space and time.
E) Strong promoters in eukaryotes are generally fully active in the absence of regulatory proteins.

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Which of the following base pairs can form a hydrophobic interaction with a protein in the major groove?


A) A - T
B) G - C
C) T - A
D) C - G
E) Both A and C above

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Describe briefly the process by which steroid hormones affect gene expression.

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Steroid hormones usually enter a cell by...

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Briefly explain (a)why there is a lag in cell growth when bacteria are switched from a medium containing glucose to one containing lactose. (b)When the growth medium contains both lactose and glucose,what proteins will be bound to the lac operon regulatory region? (c)If only lactose is in the growth medium,what proteins will be bound to the lac operon regulatory region?

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(a)The lag represents the time required ...

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Describe and contrast positive regulation and negative regulation of gene expression.

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Positive regulation involves an activato...

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Transcription of the lactose operon in E.coli is stimulated by:


A) a mutation in the repressor gene that strengthens the affinity of the repressor for the operator.
B) a mutation in the repressor gene that weakens the affinity of the repressor for the operator.
C) a mutation in the repressor gene that weakens the affinity of the repressor for the inducer.
D) binding of the repressor to the operator.
E) the presence of glucose in the growth medium.

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RecA protein provides the functional link between DNA damage and the SOS response by displacing the LexA protein from its operator sites on the SOS genes.RecA does so by:


A) associating with polymerase holoenzyme to help it remove LexA from operator.
B) bending LexA operator DNA to force dissociation of LexA repressor.
C) binding to LexA protein to weaken directly its affinity for operator sites.
D) causing self-cleavage of LexA,thus inactivating its binding to operator.
E) competitively binding to LexA operators and serving as an activator.

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Explain how synthesis of ribosomal proteins in E.coli is regulated at the level of translation.

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Ribosomal proteins are encoded in severa...

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Protein structural motifs often have general functions in common.Which one of the following motifs is known to be involved in protein dimer formation but not in direct protein-DNA interactions?


A) ( Ξ²\beta -barrel)
B) Helix-turn-helix
C) Homeodomain
D) Leucine zipper
E) Zinc finger

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The DNA binding motif for many prokaryotic regulatory proteins,such as the lac repressor,is:


A) helix-turn-helix.
B) homeobox.
C) homeodomain.
D) leucine zipper.
E) zinc finger.

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Large numbers of micro-RNAs (miRNAs),also known as small temporal RNAs (stRNAs),have now been discovered in higher eukaryotes.Describe their characteristics and general function.

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Their primary transcripts are about 70 n...

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Which one of the following does not contribute to the activation of transcription in eurkaryotes?


A) SWI/SNF chromatin remodeling proteins
B) Histone acetyltransferases
C) Histone methylases
D) Histone deacetylases
E) Alterations in histone content

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Usually,a mutation in the promoter region of an operon causes reduced levels of synthesis of the proteins encoded by that operon.Occasionally,a mutation in the promoter region actually causes increased levels of synthesis.Can you suggest a plausible explanation?

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It is possible for a mutation to result ...

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A regulon is a(n) :


A) group of related triplet codons.
B) network of operons with a common regulator.
C) operon that is subject to regulation.
D) protein that regulates gene expression.
E) ribosomal protein that regulates translation.

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